PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG015190.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family GATA
Protein Properties Length: 139aa    MW: 14932.8 Da    PI: 10.3242
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG015190.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.58.8e-192962134
         GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                 C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk+
  CCG015190.1 29 CADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKK 62
                 ********************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004016.3E-132383IPR000679Zinc finger, GATA-type
SuperFamilySSF577168.55E-132363No hitNo description
Gene3DG3DSA:3.30.50.105.6E-162763IPR013088Zinc finger, NHR/GATA-type
CDDcd002023.01E-122863No hitNo description
PROSITE patternPS0034402954IPR000679Zinc finger, GATA-type
PROSITE profilePS5011412.072959IPR000679Zinc finger, GATA-type
PfamPF003201.0E-162963IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MLDPADKGSE SEEMSSNSQE TESPLKKTCA DCGTSKTPLW RGGPAGPKSL CNACGIRSRK  60
KKRDILGLNK GAANDKRAKK GSNNNGSSNN NNNNKQLGDG SKQRLLALGR EVLRHRRKLG  120
EEEQAAVLLM ALSYGSVYA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011000509.11e-96PREDICTED: GATA transcription factor 15-like
SwissprotQ8LG102e-42GAT15_ARATH; GATA transcription factor 15
TrEMBLU5G6U87e-68U5G6U8_POPTR; Uncharacterized protein
STRINGPOPTR_0008s22950.12e-67(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15693298
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.12e-37GATA transcription factor 15